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sll1951 sll1951 slr1565 slr1565 slr1930 slr1930 sll1930 sll1930 slr2016 slr2016 slr1456 slr1456 slr1929 slr1929
"sll1930" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1930Transposase (164 aa)    
Predicted Functional Partners:
slr1565
Hypothetical protein (113 aa)
           
  0.940
slr1930
Hypothetical protein (186 aa)
           
  0.940
slr2016
Hypothetical protein (158 aa)
           
  0.920
slr1929
Hypothetical protein (183 aa)
           
  0.841
slr1456
Type 4 pilin-like protein (175 aa)
           
  0.807
sll1951
Hemolysin (1741 aa)
           
  0.756
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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