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eda eda glpD glpD glcD glcD SYNGTS_2571 SYNGTS_2571 glcE glcE glcF glcF frdA frdA SYNGTS_1195 SYNGTS_1195 slr0458 slr0458 slr1762 slr1762 cbbZp cbbZp
"glcF" - Glycolate oxidase subunit in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcFGlycolate oxidase subunit (Fe-S) protein (460 aa)    
Predicted Functional Partners:
glcD
Glycolate oxidase subunit GlcD (492 aa)
 
  0.997
glcE
Glycolate oxidase subunit GlcE (434 aa)
 
 
  0.989
cbbZp
Phosphoglycolate phosphatase (221 aa)
       
  0.964
slr0458
Hypothetical protein (211 aa)
       
    0.953
slr1762
Hypothetical protein (221 aa)
       
    0.953
SYNGTS_2571
Succinate dehydrogenase iron-sulfur protein (245 aa)
 
 
  0.937
eda
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (206 aa)
         
    0.900
SYNGTS_1195
Succinate dehydrogenase iron-sulphur protein subunit (331 aa)
 
 
  0.849
frdA
Succinate dehydrogenase flavoprotein subunit (575 aa)
   
 
  0.819
glpD
Glycerol-3-phosphate dehydrogenase (553 aa)
   
 
  0.814
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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