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ndhF3 ndhF3 ndhI ndhI ndhF4 ndhF4 ndhD6 ndhD6 slr2006 slr2006 slr2008 slr2008 slr2012 slr2012 slr2011 slr2011 ssr3410 ssr3410 ssr3409 ssr3409 slr2010 slr2010
"ndhD6" - Monovalent cation/H+ antiporter subunit D in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndhD6Monovalent cation/H+ antiporter subunit D (495 aa)    
Predicted Functional Partners:
slr2012
Monovalent cation/H+ antiporter subunit B (215 aa)
 
 
  0.994
slr2010
Hypothetical protein (130 aa)
     
  0.990
ssr3409
Hypothetical protein (97 aa)
 
     
  0.990
slr2006
Monovalent cation/H+ antiporter subunit C (114 aa)
 
   
  0.985
slr2011
Hypothetical protein (199 aa)
 
     
  0.985
ssr3410
Hypothetical protein (98 aa)
 
     
  0.984
slr2008
Hypothetical protein (116 aa)
 
   
  0.983
ndhF4
NADH dehydrogenase subunit 5 (634 aa)
  0.979
ndhF3
NADH dehydrogenase subunit 5 (615 aa)
 
  0.972
ndhI
NADH dehydrogenase subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (193 aa)
 
 
  0.910
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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