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sll0933 sll0933 slr0575 slr0575 sll1418 sll1418 psbO psbO sll0609 sll0609 sll0558 sll0558 psbW psbW psaF psaF sll2002 sll2002 ssr2016 ssr2016 slr1603 slr1603
"ssr2016" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr2016Hypothetical protein (65 aa)    
Predicted Functional Partners:
psbW
Photosystem II 13 kD protein Psb28 (112 aa)
   
        0.884
sll0558
Hypothetical protein (233 aa)
   
        0.792
sll0609
Hypothetical protein (121 aa)
   
        0.782
sll0933
Hypothetical protein (158 aa)
   
          0.773
sll2002
Hypothetical protein (292 aa)
   
        0.764
psaF
Photosystem I subunit III; Probably participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin to PSI (165 aa)
   
        0.751
slr0575
Hypothetical protein (184 aa)
   
        0.732
psbO
Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII (274 aa)
   
        0.728
slr1603
Hypothetical protein (440 aa)
   
        0.728
sll1418
Hypothetical protein (188 aa)
   
        0.723
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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