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slr0287 slr0287 slr1160 slr1160 slr1533 slr1533 slr1732 slr1732 slr0263 slr0263 slr1547 slr1547 slr1546 slr1546 slr2144 slr2144 SYNGTS_0897 SYNGTS_0897 sll0687 sll0687 SYNGTS_1217 SYNGTS_1217
"slr1546" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1546Hypothetical protein (212 aa)    
Predicted Functional Partners:
SYNGTS_0897
RNA polymerase sigma-E factor (223 aa)
 
 
 
  0.946
sll0687
Hypothetical protein (185 aa)
     
 
  0.780
SYNGTS_1217
RNA polymerase sigma-E factor (186 aa)
     
 
  0.780
slr1547
Hypothetical protein (332 aa)
              0.779
slr1533
Hypothetical protein (115 aa)
   
          0.778
slr1732
Hypothetical protein (149 aa)
   
          0.778
slr0287
Hypothetical protein (118 aa)
   
          0.777
slr0263
Hypothetical protein (101 aa)
   
          0.777
slr1160
Hypothetical protein (204 aa)
   
          0.775
slr2144
Hypothetical protein (301 aa)
   
          0.774
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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