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sll1940 sll1940 slr1276 slr1276 slr1275 slr1275 sll0173 sll0173 slr1753 slr1753 slr1406 slr1406 sll0312 sll0312 sll0833 sll0833 slr1272 slr1272 slr1077 slr1077 sll1927 sll1927
"slr1406" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1406Hypothetical protein (181 aa)    
Predicted Functional Partners:
sll0173
Hypothetical protein (352 aa)
   
     
  0.785
slr1272
Hypothetical protein (254 aa)
           
  0.755
sll1940
Hypothetical protein (157 aa)
           
  0.755
slr1753
Hypothetical protein (1749 aa)
           
  0.755
slr1077
Hypothetical protein (386 aa)
           
  0.755
sll0833
OppC in a binding protein-dependent transport system (371 aa)
           
  0.751
sll0312
OppB in a binding protein-dependent transportsystem (337 aa)
           
  0.751
sll1927
ABC transporter (650 aa)
           
  0.751
slr1276
Hypothetical protein (275 aa)
           
  0.668
slr1275
Hypothetical protein (284 aa)
           
  0.668
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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