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SYNGTS_1195 SYNGTS_1195 SYNGTS_2571 SYNGTS_2571 frdA frdA merA merA sucD sucD gltA gltA sucC sucC odhB odhB slr1888 slr1888 pta pta thl thl
"slr1888" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1888Hypothetical protein (630 aa)    
Predicted Functional Partners:
pta
Phosphate acetyltransferase; Involved in acetate metabolism (697 aa)
       
  0.822
gltA
Citrate synthase (397 aa)
     
  0.743
sucC
succinate--CoA ligase (401 aa)
     
    0.722
SYNGTS_2571
Succinate dehydrogenase iron-sulfur protein (245 aa)
     
 
    0.715
SYNGTS_1195
Succinate dehydrogenase iron-sulphur protein subunit (331 aa)
     
 
    0.715
odhB
Dihydrolipoamide acetyltransferase component(E2) of pyruvate dehydrogenase complex (433 aa)
     
    0.694
sucD
succinyl-CoA synthetase (302 aa)
     
    0.683
thl
Acetyl coenzyme A acetyltransferase (409 aa)
 
    0.674
frdA
Succinate dehydrogenase flavoprotein subunit (575 aa)
   
 
    0.673
merA
Mercuric reductase (518 aa)
     
 
  0.651
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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