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slr0476 slr0476 slr1704 slr1704 ssl2717 ssl2717 slr1275 slr1275 slr1276 slr1276 slr1579 slr1579 cpcD cpcD slr1301 slr1301 slr1721 slr1721 ssr2554 ssr2554 sll1155 sll1155
"slr1721" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1721Hypothetical protein (492 aa)    
Predicted Functional Partners:
slr0476
Hypothetical protein (136 aa)
   
          0.778
slr1276
Hypothetical protein (275 aa)
   
          0.778
ssr2554
Hypothetical protein (88 aa)
   
          0.778
sll1155
Hypothetical protein (113 aa)
   
          0.778
cpcD
Phycocyanin associated linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (83 aa)
   
          0.777
slr1579
Hypothetical protein (562 aa)
   
          0.776
slr1275
Hypothetical protein (284 aa)
   
          0.775
ssl2717
Hypothetical protein (70 aa)
   
          0.775
slr1704
Hypothetical protein (274 aa)
   
          0.775
slr1301
Hypothetical protein (535 aa)
   
          0.775
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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