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ppc ppc sll1358 sll1358 mdh mdh me me fumC fumC slr2121 slr2121 slr2120 slr2120 slr2123 slr2123 slr2124 slr2124 slr2122 slr2122 slr2119 slr2119
"slr2121" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2121Hypothetical protein (215 aa)    
Predicted Functional Partners:
sll1358
Hypothetical protein (394 aa)
         
    0.900
slr2120
Hypothetical protein (330 aa)
 
          0.885
slr2123
D-isomer specific 2-hydroxyacid dehydrogenase family protein (318 aa)
 
        0.852
slr2122
Hypothetical protein (225 aa)
              0.831
slr2124
Short-chain alcohol dehydrogenase family protein (249 aa)
              0.825
me
Malic enzyme (463 aa)
     
 
    0.801
mdh
2-ketoacid dehydrogenase using malate or lactate as substrate; Catalyzes the reversible oxidation of malate to oxaloacetate (324 aa)
         
    0.800
fumC
Fumarase; Catalyzes the reversible addition of water to fumarate to give L-malate (466 aa)
         
    0.800
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (1034 aa)
         
    0.800
slr2119
Hypothetical protein (278 aa)
 
          0.784
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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