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sll0858 sll0858 slr0476 slr0476 sll1586 sll1586 murF murF sll1247 sll1247 sll0710 sll0710 slr1732 slr1732 slr0316 slr0316 sll0702 sll0702 slr2127 slr2127 slr0869 slr0869
"sll1247" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1247Hypothetical protein (457 aa)    
Predicted Functional Partners:
slr1732
Hypothetical protein (149 aa)
   
     
  0.904
slr0316
Hypothetical protein (263 aa)
           
  0.861
slr2127
Hypothetical protein (191 aa)
           
  0.861
sll0702
Hypothetical protein (130 aa)
           
  0.842
sll0710
Hypothetical protein (726 aa)
           
  0.841
sll1586
Hypothetical protein (1749 aa)
   
     
  0.840
slr0869
Hypothetical protein (812 aa)
           
  0.825
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino-pimelate-D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (454 aa)
         
  0.790
sll0858
Hypothetical protein (197 aa)
   
          0.776
slr0476
Hypothetical protein (136 aa)
   
          0.775
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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