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slr1932 slr1932 sll0778 sll0778 ycf38 ycf38 sll1898 sll1898 ctaB ctaB slr1137 slr1137 coxB coxB slr1138 slr1138 SYNGTS_1544 SYNGTS_1544 SYNGTS_1396 SYNGTS_1396 SYNGTS_1395 SYNGTS_1395
"sll1898" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1898Hypothetical protein (332 aa)    
Predicted Functional Partners:
ctaB
Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (316 aa)
 
  0.995
SYNGTS_1544
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (300 aa)
 
 
  0.966
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (332 aa)
 
 
  0.960
slr1138
Cytochrome c oxidase subunit III (204 aa)
 
 
  0.936
slr1137
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (551 aa)
 
 
  0.929
SYNGTS_1395
Cytochrome c oxidase subunit I (544 aa)
 
 
  0.928
SYNGTS_1396
Cytochrome c oxidase subunit III (198 aa)
 
 
  0.924
sll0778
ABC transporter (790 aa)
       
    0.891
ycf38
Conserved hypothetical protein Ycf38 (294 aa)
       
    0.737
slr1932
Hypothetical protein (231 aa)
           
  0.712
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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