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sll0157 sll0157 psbO psbO petH petH sll1071 sll1071 ssl3044 ssl3044 cyp120 cyp120 slr1417 slr1417 SYNGTS_2145 SYNGTS_2145 gltD gltD SYNGTS_0100 SYNGTS_0100 slr1565 slr1565
"ssl3044" - Hydrogenase component in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssl3044Hydrogenase component (99 aa)    
Predicted Functional Partners:
gltD
NADH-glutamate synthase small subunit (494 aa)
     
  0.937
SYNGTS_2145
NifS protein (386 aa)
   
  0.884
SYNGTS_0100
NifS protein (391 aa)
   
  0.884
petH
ferredoxin-NADP oxidoreductase; Essential for growth (413 aa)
   
 
  0.883
cyp120
Cytochrome P450 (444 aa)
     
  0.826
psbO
Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII (274 aa)
   
   
  0.766
sll1071
Hypothetical protein (275 aa)
   
        0.742
sll0157
Hypothetical protein (256 aa)
   
        0.723
slr1565
Hypothetical protein (113 aa)
   
 
  0.721
slr1417
Hypothetical protein (118 aa)
   
 
  0.721
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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