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STRINGSTRING
rpoZ rpoZ SYNGTS_1873 SYNGTS_1873 rbcX rbcX sll1532 sll1532 sll1568 sll1568 ssl1047 ssl1047 ccmN ccmN slr2025 slr2025 sll0877 sll0877 sll1886 sll1886 slr1966 slr1966
"sll1532" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1532Hypothetical protein (211 aa)    
Predicted Functional Partners:
rpoZ
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity) (76 aa)
         
  0.946
SYNGTS_1873
No annotation available (338 aa)
         
  0.927
rbcX
Possible Rubisco chaperonin (138 aa)
   
     
  0.797
sll1886
Hypothetical protein (188 aa)
   
          0.778
slr2025
Hypothetical protein (153 aa)
   
          0.778
ssl1047
Hypothetical protein (64 aa)
   
          0.772
sll1568
Fibrillin (202 aa)
   
          0.772
ccmN
Hypothetical protein (241 aa)
   
          0.771
slr1966
Hypothetical protein (243 aa)
   
          0.770
sll0877
Hypothetical protein (456 aa)
   
          0.769
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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