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STRINGSTRING
sll0038 sll0038 rcp1 rcp1 sll1291 sll1291 sll0267 sll0267 cph2 cph2 sll0779 sll0779 sll0043 sll0043 slr1041 slr1041 sll1124 sll1124 slr1037 slr1037 slr1042 slr1042
"sll0267" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0267Hypothetical protein (1578 aa)    
Predicted Functional Partners:
sll0043
CheA like protein Hik18 (1402 aa)
 
 
  0.997
sll0779
PleD gene product homolog (884 aa)
 
 
0.990
cph2
Hypothetical protein; Photoreceptor which exists in two forms that are reversibly interconvertible by light- the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region (1276 aa)
 
 
0.990
sll0038
PatA subfamily protein PixG/PisG/TaxP1/Rer1/Rre36; Controls heterocyst pattern formation (402 aa)
   
 
  0.978
rcp1
CheY subfamily protein Rcp1/Rcp/Rre27; Forms a two-component system with cph1 in which it acts as receiver substrate (147 aa)
   
 
  0.978
sll1291
PatA subfamily protein Rre12/TaxP2; Controls heterocyst pattern formation (401 aa)
   
 
  0.978
slr1037
CheY subfamily protein Rre10 (131 aa)
   
 
  0.978
slr1042
CheY subfamily protein PilH/TaxY3/Rre7 (121 aa)
 
 
  0.978
slr1041
PatA subfamily protein PilG/TaxP3/Rre6; Controls heterocyst pattern formation (388 aa)
   
 
  0.978
sll1124
Sensory transduction histidine kinase PlpA/Hik3 (1371 aa)
   
 
  0.953
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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