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ponA ponA mrcB mrcB slr1534 slr1534 mrcA mrcA ctpA ctpA nlpD nlpD bgl bgl prc prc slr0591 slr0591 ctpB ctpB slr1033 slr1033
"nlpD" - Lipoprotein NlpD in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlpDLipoprotein NlpD (715 aa)    
Predicted Functional Partners:
bgl
Beta-glucosidase (538 aa)
 
   
  0.731
mrcA
Penicillin-binding protein 1B (650 aa)
   
   
  0.681
slr0591
Hypothetical protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (355 aa)
           
  0.670
slr1033
Hypothetical protein (565 aa)
           
  0.670
ponA
Penicillin-binding protein 1A (885 aa)
   
   
  0.648
ctpA
Carboxyl-terminal processing protease; Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II (PSII). This proteolytic processing is necessary to allow the light-driven assembly of the oxygen- evolving cluster (a tetranuclear manganese), which is responsible for photosynthetic water oxidation (427 aa)
 
 
  0.648
prc
Carboxyl-terminal protease (423 aa)
 
 
  0.631
ctpB
Carboxyl-terminal protease (462 aa)
 
 
  0.631
mrcB
Penicillin-binding protein 1B (749 aa)
   
   
  0.603
slr1534
Hypothetical protein (301 aa)
     
 
    0.589
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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