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STRINGSTRING
sll0012 sll0012 slr1871 slr1871 slr1870 slr1870 sll0201 sll0201 slr1705 slr1705 sll0200 sll0200 sll0782 sll0782 slr1245 slr1245 slr0302 slr0302 slr0322 slr0322 sll1895 sll1895
"sll0201" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0201Transposase (164 aa)    
Predicted Functional Partners:
sll0200
Transposase (119 aa)
          0.877
slr0302
PleD gene product homolog (768 aa)
           
  0.801
sll1895
Hypothetical protein (696 aa)
           
  0.801
slr0322
CheA-like protein PilL/TaxAY3/Hik43 (1095 aa)
           
  0.756
sll0012
Transposase (261 aa)
           
  0.754
sll0782
Putative protein kinase (369 aa)
           
  0.690
slr1871
Transcriptional regulator (295 aa)
           
  0.665
slr1705
Aspartoacylase, ASP (288 aa)
           
  0.664
slr1245
Transcriptional regulator (302 aa)
           
  0.655
slr1870
Hypothetical protein (249 aa)
           
  0.630
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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