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sll0822 sll0822 sll0359 sll0359 sll0537 sll0537 urtE urtE rpoD2-V rpoD2-V ssl1300 ssl1300 sll1017 sll1017 sll0691 sll0691 SYNGTS_2367 SYNGTS_2367 nhaS3 nhaS3 aqpZ aqpZ
"ssl1300" - PEMI-like protein homologue in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssl1300PEMI-like protein homologue (85 aa)    
Predicted Functional Partners:
SYNGTS_2367
Probable transcription regulator (133 aa)
              0.866
rpoD2-V
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (369 aa)
           
  0.753
sll0359
Hypothetical protein (155 aa)
           
  0.630
sll0537
Ammonium/methylammonium permease (541 aa)
           
  0.628
sll0822
Hypothetical protein (129 aa)
           
  0.628
sll0691
Hypothetical protein (200 aa)
              0.547
urtE
Urea transport system ATP-binding protein (249 aa)
           
  0.539
aqpZ
Water channel protein aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (247 aa)
           
  0.531
sll1017
Ammonium/methylammonium permease (442 aa)
           
  0.520
nhaS3
Na/H+ antiporter; Na(+)/H(+) antiporter that transports sodium from the cytoplasm into the thylakoid lumen in exchange for protons. Contributes to sodium homeostasis and tolerance. Has also Li(+)/H(+) antiport activity under K(+)-free conditions, but not under K(+)-rich conditions (461 aa)
              0.466
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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