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def def sll1873 sll1873 slr0309 slr0309 sll0282 sll0282 slr0904 slr0904 smf smf slr0613 slr0613 sll0283 sll0283 sll0558 sll0558 sll1353 sll1353 sll1242 sll1242
"slr0904" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0904Hypothetical protein (509 aa)    
Predicted Functional Partners:
sll1873
Hypothetical protein (121 aa)
           
  0.927
sll0283
Hypothetical protein (412 aa)
           
  0.921
slr0613
Hypothetical protein (173 aa)
           
  0.921
sll0558
Hypothetical protein (233 aa)
           
  0.920
sll0282
Hypothetical protein (326 aa)
           
  0.899
slr0309
P-methylase (461 aa)
           
  0.899
sll1353
Sensory transduction histidine kinase Hik15 (998 aa)
           
  0.898
smf
Hypothetical protein (398 aa)
   
  0.879
def
Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity) (187 aa)
          0.874
sll1242
Hypothetical protein (536 aa)
           
  0.826
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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