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STRINGSTRING
SYNGTS_2833 SYNGTS_2833 trpC trpC sll0402 sll0402 rpsR rpsR rpmG rpmG slr0825 slr0825 slr0583 slr0583 SYNGTS_2240 SYNGTS_2240 sll0539 sll0539 sll1298 sll1298 sll1374 sll1374
"slr0825" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0825Hypothetical protein (637 aa)    
Predicted Functional Partners:
sll1298
Dienelactone hydrolase (246 aa)
   
   
  0.884
slr0583
Hypothetical protein (310 aa)
   
        0.778
SYNGTS_2833
Aspartate aminotransferase (389 aa)
   
   
  0.757
sll0402
Aspartate aminotransferase (389 aa)
   
   
  0.757
SYNGTS_2240
Aspartate aminotransferase (394 aa)
   
   
  0.757
trpC
Indole-3-glycerol phosphate synthase (295 aa)
           
  0.745
rpmG
50S ribosomal protein L33 (65 aa)
              0.599
sll0539
Hypothetical protein (397 aa)
              0.513
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (71 aa)
              0.431
sll1374
Melibiose carrier protein (544 aa)
   
        0.423
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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