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STRINGSTRING
petH petH ssl0788 ssl0788 slr1160 slr1160 cobQ cobQ slr0619 slr0619 ssr1041 ssr1041 slr0086 slr0086 SYNGTS_0100 SYNGTS_0100 SYNGTS_2145 SYNGTS_2145 cyp120 cyp120 gltD gltD
"ssr1041" - NAD-reducing hydrogenase gamma subunit homolog in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr1041NAD-reducing hydrogenase gamma subunit homolog (79 aa)    
Predicted Functional Partners:
gltD
NADH-glutamate synthase small subunit (494 aa)
     
  0.937
SYNGTS_2145
NifS protein (386 aa)
   
  0.884
SYNGTS_0100
NifS protein (391 aa)
   
  0.884
slr0619
Hypothetical protein (348 aa)
              0.859
petH
ferredoxin-NADP oxidoreductase; Essential for growth (413 aa)
     
 
  0.844
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation (By similarity) (498 aa)
              0.831
cyp120
Cytochrome P450 (444 aa)
     
  0.826
slr0086
Hypothetical protein (531 aa)
 
 
  0.803
ssl0788
Hypothetical protein (97 aa)
   
          0.772
slr1160
Hypothetical protein (204 aa)
   
          0.771
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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