Full Link:
STRINGSTRING
slr1566 slr1566 slr1098 slr1098 slr1930 slr1930 sll1930 sll1930 slr1565 slr1565 ssl2667 ssl2667 csd csd miaB miaB SYNGTS_0100 SYNGTS_0100 slr0075 slr0075 SYNGTS_2145 SYNGTS_2145
"slr1565" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1565Hypothetical protein (113 aa)    
Predicted Functional Partners:
slr1098
Hypothetical protein (252 aa)
     
 
  0.992
slr1930
Hypothetical protein (186 aa)
           
  0.940
sll1930
Transposase (164 aa)
           
  0.940
csd
NifS protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (420 aa)
   
 
  0.935
ssl2667
NifU protein (76 aa)
   
 
  0.931
SYNGTS_2145
NifS protein (386 aa)
 
   
  0.881
SYNGTS_0100
NifS protein (391 aa)
 
   
  0.875
slr1566
Hypothetical protein (395 aa)
   
        0.852
miaB
(dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (451 aa)
   
   
  0.807
slr0075
ABC transporter subunit Ycf16 (256 aa)
   
 
  0.786
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (1%)