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STRINGSTRING
hlyD hlyD sll1951 sll1951 sll0720 sll0720 SYNGTS_3062 SYNGTS_3062 slr1575 slr1575 slr0104 slr0104 slr0510 slr0510 sll1169 sll1169 slr1885 slr1885 sll1708 sll1708 slr0842 slr0842
"SYNGTS_3062" - Haemolysin secretion ATP-binding protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_3062Haemolysin secretion ATP-binding protein (733 aa)    
Predicted Functional Partners:
hlyD
Hemolysin secretion protein (583 aa)
 
   
  0.970
sll0720
apxIC gene product hemolysin activation protein (147 aa)
 
     
  0.936
sll1951
Hemolysin (1741 aa)
 
     
  0.903
sll1708
NarL subfamily protein Rre17 (226 aa)
         
  0.821
slr0842
Hypothetical protein (404 aa)
     
   
  0.796
slr0510
Hypothetical protein (505 aa)
   
   
  0.761
sll1169
Hypothetical protein (238 aa)
   
   
  0.761
slr1575
Hypothetical protein (479 aa)
           
  0.757
slr0104
Hypothetical protein (811 aa)
           
  0.757
slr1885
Hypothetical protein (192 aa)
           
  0.757
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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