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degT degT sll1509 sll1509 ssl0352 ssl0352 slr1097 slr1097 ssl3364 ssl3364 ssr2781 ssr2781 slr0975 slr0975 ssl3549 ssl3549 ssr0349 ssr0349 slr0888 slr0888 slr1911 slr1911
"ssr2781" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr2781Hypothetical protein (83 aa)    
Predicted Functional Partners:
degT
Pleiotropic regulatory protein DegT (385 aa)
              0.779
ssl3364
Hypothetical protein (74 aa)
   
          0.776
ssr0349
Hypothetical protein (63 aa)
   
          0.763
ssl3549
Hypothetical protein (76 aa)
   
          0.757
slr1097
Hypothetical protein (163 aa)
   
          0.757
slr0975
Hypothetical protein (285 aa)
   
          0.756
ssl0352
Hypothetical protein (58 aa)
   
          0.751
slr0888
Hypothetical protein (168 aa)
   
          0.750
slr1911
Hypothetical protein (142 aa)
   
          0.750
sll1509
Hypothetical protein (109 aa)
   
          0.745
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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