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BL00732 BL00732 citG citG pyk pyk citZ citZ BLi03061 BLi03061 mmgD mmgD BL00399 BL00399 BL02891 BL02891 BL00561 BL00561 citA citA mdh mdh
"mdh" - Malate dehydrogenase in Bacillus licheniformis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (312 aa)    
Predicted Functional Partners:
citZ
Citrate synthase (372 aa)
   
  0.987
citA
Hypothetical protein (363 aa)
   
  0.977
mmgD
Citrate synthase 3 (371 aa)
   
  0.977
pyk
Pyruvate kinase (585 aa)
   
  0.959
BLi03061
Isocitrate dehydrogenase (438 aa)
   
 
  0.950
BL02891
Citrate synthase I (363 aa)
   
  0.945
BL00399
Citrate synthase (372 aa)
   
  0.943
BL00561
Citrate synthase 3 (371 aa)
   
  0.940
citG
Fumarate hydratase (462 aa)
   
  0.922
BL00732
Fumarate hydratase (462 aa)
   
  0.922
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis, B. licheniformis ATCC 14580, Bacillus licheniformis, Bacillus licheniformis ATCC 14580, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis str. ATCC 14580, Bacillus licheniformis str. DSM 13, Bacillus licheniformis strain ATCC 14580, Bacillus licheniformis strain DSM 13, Bacillus sp. WED10.6, Clostridium licheniforme, DSM 13, Denitrobacillus licheniformis
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