Full Link:
STRINGSTRING
Phatr11192 Phatr11192 Phatr9255 Phatr9255 Phatr22411 Phatr22411 Phatr37372 Phatr37372 Phatr25739 Phatr25739 Phatr10213 Phatr10213 Phatr25521 Phatr25521 Phatr10306 Phatr10306 Phatr21608 Phatr21608 ELO6b_1 ELO6b_1 ELO6b_2 ELO6b_2
"Phatr10213" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10213Predicted protein (182 aa)    
Predicted Functional Partners:
Phatr25739
Predicted protein (285 aa)
 
 
 
  0.567
Phatr21608
Predicted protein (276 aa)
 
 
 
  0.509
Phatr25521
Predicted protein (258 aa)
 
 
 
  0.508
Phatr11192
Predicted protein (172 aa)
 
 
 
  0.496
Phatr9255
Predicted protein (278 aa)
       
 
  0.474
ELO6b_1
Delta 6 desaturase (216 aa)
       
 
  0.474
ELO6b_2
Elongase delta 6 elongase (278 aa)
       
 
  0.474
Phatr37372
Predicted protein (289 aa)
 
 
 
  0.466
Phatr22411
Predicted protein (321 aa)
   
          0.439
Phatr10306
Predicted protein (267 aa)
 
 
 
  0.437
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (1%)