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Phatr34120 Phatr34120 Phatr10546 Phatr10546 ACC2 ACC2 UGP/PGM UGP/PGM PGM_2 PGM_2 Phatr4059 Phatr4059 PGM_1 PGM_1 Tkl Tkl Phatr32326 Phatr32326 Phatr13382 Phatr13382 Phatr29260 Phatr29260
"Phatr10546" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10546Predicted protein (302 aa)    
Predicted Functional Partners:
Phatr13382
Predicted protein (244 aa)
     
  0.955
Tkl
Transketolase (664 aa)
   
 
  0.924
Phatr29260
Transketolase (684 aa)
   
 
  0.924
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
       
  0.920
PGM_1
Mutase phosphoglucomutase (600 aa)
       
  0.920
Phatr4059
Predicted protein (312 aa)
     
  0.918
Phatr32326
Predicted protein (309 aa)
     
  0.918
PGM_2
Phosphoglucomutase (528 aa)
   
 
  0.909
ACC2
Biotin carboxylase (2282 aa)
   
   
  0.713
Phatr34120
Predicted protein (254 aa)
   
 
  0.671
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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