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Phatr17772 Phatr17772 Phatr6711 Phatr6711 Phatrdraft559 Phatrdraft559 Phatr13470 Phatr13470 Phatr7678 Phatr7678 Phatr11438 Phatr11438 Phatr32830 Phatr32830 Phatr47271 Phatr47271 Phatr49325 Phatr49325 Phatr19000 Phatr19000 Phatr47250 Phatr47250
"Phatr11438" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11438Predicted protein; Adds multiple copies of isopentenyl pyrophosphate (IPP) to farnesyl pyrophosphate (FPP) to produce dehydrodolichyl diphosphate (Dedol-PP), a precusrosor of dolichol which is utilized as a sugar carrier in protein glycosylation in the endoplasmic reticulum (ER) (247 aa)    
Predicted Functional Partners:
Phatrdraft559
Predicted protein (368 aa)
   
   
  0.627
Phatr7678
Predicted protein (134 aa)
   
   
  0.627
Phatr47250
Phosphatidate cytidylyltransferase (574 aa)
   
   
  0.627
Phatr17772
Predicted protein (1313 aa)
         
  0.618
Phatr49325
Predicted protein (343 aa)
     
  0.581
Phatr47271
Predicted protein (330 aa)
     
  0.577
Phatr6711
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (189 aa)
   
   
  0.562
Phatr32830
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (393 aa)
   
   
  0.562
Phatr13470
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (194 aa)
   
   
  0.562
Phatr19000
Farnesyltranstransferase (337 aa)
   
  0.554
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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