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ACL ACL Phatr10902 Phatr10902 Phatr12810 Phatr12810 Phatr38891 Phatr38891 Phatr47067 Phatr47067 Phatr9654 Phatr9654 PHATR_3140 PHATR_3140 Phatr19324 Phatr19324 Phatr10025 Phatr10025 Phatr27735 Phatr27735 Phatr50453 Phatr50453
"Phatr12810" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr12810Predicted protein (202 aa)    
Predicted Functional Partners:
Phatr19324
Predicted protein (554 aa)
 
 
  0.985
PHATR_3140
Predicted protein (196 aa)
 
 
  0.958
Phatr9654
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (347 aa)
 
 
  0.929
Phatr38891
Predicted protein (373 aa)
 
  0.925
Phatr10025
Predicted protein (295 aa)
 
   
  0.857
Phatr47067
Predicted protein (1237 aa)
   
   
  0.813
Phatr27735
Predicted protein (538 aa)
   
   
  0.754
Phatr50453
Predicted protein (279 aa)
   
   
  0.743
ACL
Atp-citrate synthase (1082 aa)
   
   
  0.661
Phatr10902
Predicted protein (473 aa)
         
  0.652
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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