Full Link:
STRINGSTRING
Phatr16814 Phatr16814 GltX GltX Phatr27735 Phatr27735 Phatr24739 Phatr24739 ACC2 ACC2 Phatr13664 Phatr13664 Phatr17238 Phatr17238 Phatr47067 Phatr47067 Phatrdraft1682 Phatrdraft1682 Phatr46712 Phatr46712 Phatr12107 Phatr12107
"Phatr13664" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13664Predicted protein (545 aa)    
Predicted Functional Partners:
Phatr47067
Predicted protein (1237 aa)
   
        0.551
Phatr27735
Predicted protein (538 aa)
   
   
  0.538
Phatr12107
Predicted protein (460 aa)
         
  0.536
Phatr16814
Predicted protein (662 aa)
     
   
  0.522
ACC2
Biotin carboxylase (2282 aa)
   
        0.520
Phatrdraft1682
Anthranilate synthase (927 aa)
         
  0.507
Phatr17238
Anthranilate synthase (958 aa)
         
  0.507
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
              0.491
Phatr24739
Predicted protein (1594 aa)
              0.491
Phatr46712
Predicted protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (276 aa)
   
 
  0.482
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (1%)