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STRINGSTRING
Phatr9283 Phatr9283 Phatr15777 Phatr15777 Phatr45758 Phatr45758 Phatr43649 Phatr43649 Phatr13706 Phatr13706 Phatr7755 Phatr7755 Phatr19901 Phatr19901 Phatr42282 Phatr42282 Phatr12813 Phatr12813 Phatr42018 Phatr42018 Phatr23717 Phatr23717
"Phatr13706" - Flavodoxin in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13706Flavodoxin (176 aa)    
Predicted Functional Partners:
Phatr19901
Predicted protein (900 aa)
     
 
  0.983
Phatr42282
Predicted protein (383 aa)
     
   
  0.678
Phatr9283
Predicted protein (623 aa)
   
  0.582
Phatr7755
Predicted protein (88 aa)
   
  0.582
Phatr45758
Nadph-cytochrome P450 reductase (753 aa)
   
  0.582
Phatr43649
Predicted protein (775 aa)
   
  0.582
Phatr42018
Ferredoxin--NADP reductase (320 aa)
   
  0.582
Phatr23717
Ferredoxin--NADP reductase (340 aa)
   
  0.582
Phatr15777
Ferredoxin--NADP reductase (299 aa)
   
  0.582
Phatr12813
Ferredoxin--NADP reductase (298 aa)
   
  0.582
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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