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STRINGSTRING
Phatr8301 Phatr8301 Phatr44899 Phatr44899 Phatr43556 Phatr43556 Phatr36034 Phatr36034 Phatr14996 Phatr14996 Phatr15980 Phatr15980 Phatr11792 Phatr11792 Phatr8310 Phatr8310 Phatr7784 Phatr7784 Phatr15371 Phatr15371 Phatr11022 Phatr11022
"Phatr14996" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14996Predicted protein (85 aa)    
Predicted Functional Partners:
Phatr36034
Predicted protein (237 aa)
   
   
  0.597
Phatr15371
Predicted protein (141 aa)
   
   
  0.560
Phatr8301
Predicted protein (80 aa)
   
        0.554
Phatr11792
Predicted protein (278 aa)
   
        0.550
Phatr8310
Predicted protein (77 aa)
   
        0.534
Phatr15980
Predicted protein (119 aa)
   
        0.528
Phatr43556
Predicted protein (249 aa)
   
        0.525
Phatr7784
Predicted protein (79 aa)
   
          0.524
Phatr44899
Predicted protein (288 aa)
   
        0.523
Phatr11022
Predicted protein (366 aa)
   
        0.520
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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