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STRINGSTRING
ACC2 ACC2 Phatr49312 Phatr49312 Phatr23164 Phatr23164 Phatr47992 Phatr47992 Phatr51040 Phatr51040 Phatr15031 Phatr15031 PCNA PCNA Phatr45431 Phatr45431 Phatr10539 Phatr10539 Phatr18549 Phatr18549 Phatr36142 Phatr36142
"Phatr15031" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15031Predicted protein (118 aa)    
Predicted Functional Partners:
Phatr49312
Predicted protein (1592 aa)
     
  0.978
Phatr18549
Predicted protein (1250 aa)
     
  0.854
Phatr47992
Predicted protein (432 aa)
     
  0.850
Phatr10539
Predicted protein (328 aa)
       
  0.836
Phatr36142
Predicted protein (320 aa)
       
  0.806
Phatr51040
Predicted protein (607 aa)
     
  0.798
ACC2
Biotin carboxylase (2282 aa)
     
 
  0.790
Phatr45431
Predicted protein (1158 aa)
     
  0.789
Phatr23164
Predicted protein (489 aa)
       
  0.779
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
       
 
  0.756
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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