Full Link:
STRINGSTRING
CBP CBP MYT1 MYT1 Phatr13617 Phatr13617 Phatr46289 Phatr46289 Phatr10104 Phatr10104 Phatr44512 Phatr44512 Phatr15929 Phatr15929 CaM2 CaM2 Phatr10291 Phatr10291 Phatr21744 Phatr21744 CaM1 CaM1
"Phatr15929" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15929Predicted protein (202 aa)    
Predicted Functional Partners:
Phatr44512
Predicted protein (340 aa)
       
  0.750
Phatr13617
Predicted protein (201 aa)
   
 
0.738
Phatr10104
Predicted protein (244 aa)
   
 
0.737
MYT1
Predicted protein (1108 aa)
       
 
  0.682
Phatr46289
Predicted protein (338 aa)
       
  0.681
CBP
Calcium binding protein (132 aa)
       
 
  0.549
CaM2
Calmodulin (154 aa)
       
 
  0.549
CaM1
Calmoduline (149 aa)
       
 
  0.549
Phatr21744
Predicted protein (149 aa)
       
 
  0.549
Phatr10291
Predicted protein (303 aa)
   
 
 
  0.545
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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