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STRINGSTRING
Phatr29042 Phatr29042 Phatr48904 Phatr48904 Phatr49849 Phatr49849 Phatr44500 Phatr44500 Phatr46194 Phatr46194 Phatr16341 Phatr16341 Phatr22921 Phatr22921 PHATR_4234 PHATR_4234 HSP70G HSP70G Phatr43347 Phatr43347 Sec61alpha Sec61alpha
"Phatr16341" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16341Predicted protein (323 aa)    
Predicted Functional Partners:
HSP70G
Protein heat shock protein (901 aa)
   
 
  0.519
Phatr48904
Predicted protein (417 aa)
     
 
  0.491
Phatr44500
Predicted protein (602 aa)
     
 
  0.491
Phatr43347
Predicted protein (405 aa)
     
 
  0.491
Sec61alpha
Transport protein Sec61 alpha subunit (472 aa)
     
      0.479
Phatr49849
Predicted protein (469 aa)
     
   
  0.441
Phatr46194
Predicted protein (399 aa)
     
   
  0.441
PHATR_4234
Predicted protein (286 aa)
     
   
  0.441
Phatr29042
Predicted protein (385 aa)
     
   
  0.441
Phatr22921
Predicted protein (337 aa)
     
   
  0.441
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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