Full Link:
STRINGSTRING
Phatr43677 Phatr43677 Phatr15121 Phatr15121 Phatr45692 Phatr45692 Phatrdraft509 Phatrdraft509 Phatr37291 Phatr37291 Phatr23286 Phatr23286 Phatr12921 Phatr12921 Phatr16766 Phatr16766 Phatr12322 Phatr12322 Phatr16560 Phatr16560 Phatr22703 Phatr22703
"Phatr16560" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16560Predicted protein (269 aa)    
Predicted Functional Partners:
Phatrdraft509
Predicted protein (308 aa)
 
  0.996
Phatr16766
Predicted protein (140 aa)
 
  0.994
Phatr12322
Predicted protein (212 aa)
 
  0.993
Phatr23286
Predicted protein (274 aa)
 
  0.992
Phatr12921
Predicted protein (240 aa)
   
  0.992
Phatr37291
Predicted protein (248 aa)
   
  0.990
Phatr45692
Predicted protein (700 aa)
     
  0.978
Phatr22703
Predicted protein (311 aa)
     
  0.978
Phatr15121
Predicted protein (450 aa)
       
 
  0.954
Phatr43677
Predicted protein (813 aa)
     
  0.929
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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