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Phatr17414 Phatr17414 Phatr6847 Phatr6847 Phatr31073 Phatr31073 Phatr48411 Phatr48411 Phatr51066 Phatr51066 Phatr9199 Phatr9199 Phatr17324 Phatr17324 Phatr13682 Phatr13682 Phatr19314 Phatr19314 Phatr18559 Phatr18559 Phatr17545 Phatr17545
"Phatr17545" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr17545Predicted protein (261 aa)    
Predicted Functional Partners:
Phatr9199
Predicted protein (151 aa)
   
  0.999
Phatr17324
Predicted protein (261 aa)
   
  0.999
Phatr13682
Predicted protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (220 aa)
   
  0.999
Phatr6847
Predicted protein (167 aa)
     
  0.999
Phatr18559
40S ribosomal protein S6 (245 aa)
   
  0.999
Phatr31073
Predicted protein (188 aa)
     
  0.999
Phatr51066
Predicted protein (152 aa)
     
  0.999
Phatr19314
Predicted protein (125 aa)
     
  0.999
Phatr17414
40S ribosomal protein S8 (205 aa)
     
  0.999
Phatr48411
Predicted protein (264 aa)
     
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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