Full Link:
STRINGSTRING
Phatr52174 Phatr52174 Phatr13581 Phatr13581 Phatr4216 Phatr4216 CK2_1 CK2_1 Phatr18239 Phatr18239 Phatr12614 Phatr12614 Phatr11409 Phatr11409 Phatr14627 Phatr14627 Phatr42758 Phatr42758 Phatr38931 Phatr38931 Phatr44561 Phatr44561
"Phatr18239" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18239Predicted protein (1058 aa)    
Predicted Functional Partners:
Phatr11409
Predicted protein (160 aa)
     
  0.993
Phatr42758
Predicted protein (1346 aa)
     
  0.975
Phatr38931
Predicted protein (1031 aa)
     
  0.975
Phatr44561
Predicted protein (439 aa)
     
  0.974
Phatr52174
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1143 aa)
     
  0.962
Phatr13581
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1165 aa)
     
  0.962
CK2_1
Predicted protein (341 aa)
       
  0.890
Phatr4216
Predicted protein (350 aa)
       
  0.890
Phatr14627
Predicted protein; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (188 aa)
       
  0.866
Phatr12614
Predicted protein; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (196 aa)
       
  0.866
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (2%)