Full Link:
STRINGSTRING
Phatr6433 Phatr6433 Phatr38130 Phatr38130 Phatr5904 Phatr5904 Phatr32097 Phatr32097 Phatr49220 Phatr49220 Phatr18620 Phatr18620 Phatr11271 Phatr11271 Phatr30898 Phatr30898 Phatr31375 Phatr31375 Phatr47496 Phatr47496 Phatr11901 Phatr11901
"Phatr18620" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18620Predicted protein (222 aa)    
Predicted Functional Partners:
Phatr38130
Predicted protein (199 aa)
     
  0.986
Phatr31375
Predicted protein (168 aa)
     
  0.980
Phatr11901
Predicted protein (168 aa)
     
  0.980
Phatr32097
Predicted protein (368 aa)
     
  0.964
Phatr30898
Vacuolar protein (429 aa)
     
  0.964
Phatr6433
Predicted protein (143 aa)
     
  0.887
Phatr5904
Predicted protein (206 aa)
     
  0.887
Phatr11271
Predicted protein (167 aa)
     
 
  0.861
Phatr47496
Predicted protein (359 aa)
     
  0.842
Phatr49220
Predicted protein (217 aa)
     
 
  0.629
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (2%)