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STRINGSTRING
BiP BiP HSP70A HSP70A Phatr43183 Phatr43183 HSP70G HSP70G HemE_1 HemE_1 HSP70B HSP70B Phatr18877 Phatr18877 Phatr16766 Phatr16766 HemE_2 HemE_2 hemE hemE Phatr12921 Phatr12921
"Phatr18877" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18877Predicted protein (455 aa)    
Predicted Functional Partners:
Phatr43183
Predicted protein (508 aa)
   
   
  0.560
HemE_1
Uroporphyrinogen decarboxylase (431 aa)
     
 
  0.540
HemE_2
Uroporphyrinogen decarboxylase (409 aa)
     
 
  0.540
hemE
Uroporphyrinogen decarboxylase (366 aa)
     
 
  0.540
Phatr16766
Predicted protein (140 aa)
     
 
  0.522
Phatr12921
Predicted protein (240 aa)
     
      0.499
HSP70G
Protein heat shock protein (901 aa)
   
 
  0.449
BiP
ER luminal binding protein (659 aa)
   
 
  0.449
HSP70A
Protein heat shock protein Hsp70 (653 aa)
   
 
  0.449
HSP70B
Protein heat shock protein (681 aa)
   
 
  0.449
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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