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STRINGSTRING
Act2 Act2 Phatr51157 Phatr51157 GEL3 GEL3 Phatr45153 Phatr45153 ARP ARP ARP1 ARP1 ACT1 ACT1
"GEL3" - Gelosin/severin like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEL3Gelosin/severin like protein (373 aa)    
Predicted Functional Partners:
Phatr51157
Actin/actin like proteinPredicted protein (377 aa)
     
  0.795
ARP1
Actin related protein (391 aa)
     
  0.795
ACT1
Actin/actin like proteinPredicted protein (377 aa)
     
  0.795
Act2
Actin (377 aa)
     
  0.795
Phatr45153
Predicted protein (523 aa)
     
  0.599
ARP
Actin related protein (463 aa)
     
  0.599
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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