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Phatr18027 Phatr18027 P5CS P5CS Phatr30514 Phatr30514 Phatr3969 Phatr3969 Phatr10902 Phatr10902 Phatr36913 Phatr36913 Phatr19762 Phatr19762 Phatr22113 Phatr22113 Phatr12762 Phatr12762 Phatr36165 Phatr36165 Phatr21296 Phatr21296
"Phatr19762" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr19762Predicted protein (807 aa)    
Predicted Functional Partners:
Phatr10902
Predicted protein (473 aa)
   
 
  0.950
Phatr36165
Predicted protein (448 aa)
       
  0.923
Phatr21296
Biotin synthase (437 aa)
       
  0.910
Phatr30514
Predicted protein (351 aa)
   
 
  0.906
Phatr36913
Predicted protein (357 aa)
   
 
  0.899
Phatr3969
Predicted protein (256 aa)
   
 
  0.898
Phatr22113
Bifunctional aspartokinase (870 aa)
   
 
  0.863
Phatr12762
Predicted protein (282 aa)
   
  0.815
P5CS
Delta l-pyrroline-5-carboxylate synthetase (747 aa)
   
  0.805
Phatr18027
Predicted protein (706 aa)
   
  0.805
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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