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NDK2 NDK2 Phatr14535 Phatr14535 PheRS PheRS Phatr20893 Phatr20893 Phatr28359 Phatr28359 rpl14 rpl14 Phatr2271 Phatr2271 Phatr19025 Phatr19025 Phatr14915 Phatr14915 Phatr11032 Phatr11032 Phatr1719 Phatr1719
"Phatr2271" - GTP-binding protein engA in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr2271GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis (489 aa)    
Predicted Functional Partners:
rpl14
Predicted protein (143 aa)
       
 
  0.802
Phatr14915
Predicted protein (200 aa)
   
 
  0.797
Phatr19025
Predicted protein (205 aa)
     
 
  0.772
Phatr14535
Predicted protein (102 aa)
     
 
  0.756
Phatr11032
Predicted protein (115 aa)
     
 
  0.756
Phatr28359
Predicted protein (229 aa)
     
 
  0.753
Phatr20893
Predicted protein (331 aa)
 
   
  0.603
PheRS
Phenylalanyl-trna synthetase class IIc family protein (405 aa)
   
   
  0.568
Phatr1719
Predicted protein (415 aa)
   
   
  0.539
NDK2
Nucleoside diphosphate kinase (148 aa)
       
    0.525
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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