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Phatr31465 Phatr31465 Phatr18398 Phatr18398 Phatr29011 Phatr29011 atpB atpB Phatr44603 Phatr44603 Atp1 Atp1 AtpC AtpC Phatr32923 Phatr32923 Phatr26190 Phatr26190 Phatr14529 Phatr14529 Phatr21183 Phatr21183
"Phatr29011" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr29011Predicted protein; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (170 aa)    
Predicted Functional Partners:
Phatr31465
Predicted protein (679 aa)
   
  0.979
Atp1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane (509 aa)
   
  0.979
atpB
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane (501 aa)
   
  0.961
AtpC
ATP synthase gamma chain, chloroplastic (369 aa)
   
  0.954
Phatr18398
ATP synthase gamma chain (305 aa)
   
  0.954
Phatr44603
Predicted protein (220 aa)
   
  0.950
Phatr32923
Predicted protein (313 aa)
     
  0.916
Phatr14529
Predicted protein (232 aa)
     
  0.916
Phatr26190
Predicted protein (742 aa)
       
  0.903
Phatr21183
Predicted protein (750 aa)
       
  0.903
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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