Full Link:
STRINGSTRING
Phatr23748 Phatr23748 Phatr50886 Phatr50886 Phatr31073 Phatr31073 Phatr33660 Phatr33660 Phatr48411 Phatr48411 Phatr51066 Phatr51066 Phatr21073 Phatr21073 Phatr19314 Phatr19314 Phatr30160 Phatr30160 Phatr28147 Phatr28147 rps19 rps19
"Phatr30160" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr30160Predicted protein (104 aa)    
Predicted Functional Partners:
rps19
Predicted protein (147 aa)
     
  0.999
Phatr19314
Predicted protein (125 aa)
     
  0.999
Phatr33660
Predicted protein (253 aa)
     
  0.999
Phatr23748
Predicted protein (67 aa)
     
  0.999
Phatr50886
Predicted protein (145 aa)
     
  0.999
Phatr31073
Predicted protein (188 aa)
     
  0.999
Phatr48411
Predicted protein (264 aa)
     
  0.999
Phatr51066
Predicted protein (152 aa)
   
  0.999
Phatr28147
Predicted protein (62 aa)
     
  0.999
Phatr21073
Predicted protein (110 aa)
     
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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