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Phatr49601 Phatr49601 Phatr47516 Phatr47516 MDH MDH Phatr32173 Phatr32173 Phatr46568 Phatr46568 Phatr22418 Phatr22418 PCNA PCNA KCT1 KCT1 Phatr44982 Phatr44982 DEI1 DEI1 Phatr22803 Phatr22803
"Phatr32173" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr32173Predicted protein (575 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
       
      0.842
Phatr49601
Alanine glyoxylate aminotransferase (465 aa)
     
 
  0.749
Phatr47516
Predicted protein (403 aa)
     
 
  0.734
KCT1
Beta-ketoacyl-coa thiolase (386 aa)
     
 
  0.728
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
       
 
  0.722
DEI1
Delta-3,5-delta-2,4-dienoyl-CoA isomerase (291 aa)
     
 
  0.692
MDH
Predicted protein (324 aa)
       
 
  0.652
Phatr44982
Predicted protein (203 aa)
     
 
  0.619
Phatr46568
Predicted protein (821 aa)
     
 
  0.586
Phatr22803
Predicted protein (608 aa)
     
   
  0.582
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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