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STRINGSTRING
Phatr36821 Phatr36821 Phatr8975 Phatr8975 Phatr1129 Phatr1129 LPT1 LPT1 Phatr1971 Phatr1971 GPT1 GPT1 Phatr11916 Phatr11916 Phatr42446 Phatr42446 Phatr20460 Phatr20460 Phatr3262 Phatr3262 FABI FABI
"Phatr3262" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr3262Predicted protein (220 aa)    
Predicted Functional Partners:
LPT1
1-acyl-sn-glycerol-3-phosphate acyltransferase (399 aa)
     
 
  0.939
Phatr42446
Predicted protein (315 aa)
     
 
  0.939
Phatr11916
Predicted protein (144 aa)
     
 
  0.939
Phatr8975
Predicted protein (350 aa)
         
  0.929
Phatr36821
Predicted protein (386 aa)
         
  0.929
Phatr1971
Predicted protein (492 aa)
         
  0.904
Phatr20460
Predicted protein (499 aa)
         
  0.903
Phatr1129
Predicted protein (562 aa)
         
    0.900
GPT1
Glycerol-3-phosphate o-acyltransferase (551 aa)
         
  0.860
FABI
Enoyl-acp reductase (310 aa)
   
     
  0.610
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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