Full Link:
STRINGSTRING
Shal_3992 Shal_3992 Shal_1514 Shal_1514 Shal_3998 Shal_3998 Shal_3993 Shal_3993 Shal_3991 Shal_3991 Shal_1515 Shal_1515 Shal_4003 Shal_4003 Shal_1513 Shal_1513 Shal_1907 Shal_1907 Shal_2652 Shal_2652 Shal_2531 Shal_2531
"Shal_1515" - Response regulator receiver modulated serine phosphatase in Shewanella halifaxensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Shal_1515Response regulator receiver modulated serine phosphatase (411 aa)    
Predicted Functional Partners:
Shal_1514
Putative anti-sigma regulatory factor (129 aa)
              0.845
Shal_1907
Response regulator receiver protein (120 aa)
 
        0.677
Shal_2652
Putative anti-sigma regulatory factor (334 aa)
     
 
  0.672
Shal_3992
Hypothetical protein (441 aa)
 
          0.588
Shal_3991
Cellulose synthase (618 aa)
 
     
  0.580
Shal_3993
Hypothetical protein (464 aa)
 
          0.575
Shal_2531
Two component transcriptional regulator (224 aa)
   
     
  0.555
Shal_3998
Hypothetical protein (484 aa)
   
          0.551
Shal_4003
Histidine kinase (885 aa)
 
   
  0.549
Shal_1513
Anti-sigma-factor antagonist (121 aa)
 
     
  0.548
Your Current Organism:
Shewanella halifaxensis
NCBI taxonomy Id: 458817
Other names: S. halifaxensis, S. halifaxensis HAW-EB4, Shewanella halifaxensis, Shewanella halifaxensis HAW-EB4, Shewanella halifaxensis Zhao et al. 2006, Shewanella halifaxensis str. HAW-EB4, Shewanella halifaxensis strain HAW-EB4, Shewanella sp. HAW-EB4
Server load: low (2%)