Full Link:
STRINGSTRING
rps-3 rps-3 rps-16 rps-16 rps-14 rps-14 rps-9 rps-9 rpl-5 rpl-5 rps-5 rps-5 rpl-2 rpl-2 rpl-4 rpl-4 rpl-3 rpl-3 rpl-10 rpl-10 rps-2 rps-2
"rpl-3" - 60S ribosomal protein L3 in Caenorhabditis elegans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl-360S ribosomal protein L3 ; The L3 protein is a component of the large subunit of cytoplasmic ribosomes (401 aa)    
Predicted Functional Partners:
rpl-4
60S ribosomal protein L4 (345 aa)
   
  0.999
rpl-5
60S ribosomal protein L5 ; This protein binds 5S RNA (293 aa)
   
  0.999
rps-2
40S ribosomal protein S2 (272 aa)
   
  0.999
rpl-10
60S ribosomal protein L10 (214 aa)
   
  0.999
rps-16
40S ribosomal protein S16 (144 aa)
   
  0.999
rps-5
40S ribosomal protein S5 (210 aa)
   
  0.999
rps-9
40S ribosomal protein S9 (189 aa)
   
  0.999
rps-14
40S ribosomal protein S14 (152 aa)
   
  0.999
rps-3
40S ribosomal protein S3 (247 aa)
   
  0.999
rpl-2
60S ribosomal protein L8 (260 aa)
   
  0.999
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, nematode
Server load: low (2%)