Full Link:
STRINGSTRING
pbrm-1 pbrm-1 ham-3 ham-3 swsn-6 swsn-6 snfc-5 snfc-5 swsn-2.2 swsn-2.2 psa-1 psa-1 let-526 let-526 swsn-3 swsn-3 swsn-4 swsn-4 isw-1 isw-1 C52B9.8 C52B9.8
"psa-1" - Phasmid Socket Absent family member in Caenorhabditis elegans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psa-1Phasmid Socket Absent family member (psa-1) (789 aa)    
Predicted Functional Partners:
swsn-4
Phasmid Socket Absent family member (psa-4) (1474 aa)
     
  0.996
snfc-5
Protein SNFC-5 (381 aa)
     
  0.995
swsn-6
Protein SWSN-6 (436 aa)
     
  0.988
swsn-2.2
Protein SWSN-2.2 (449 aa)
     
  0.986
ham-3
Temporarily Assigned Gene name family member (tag-246) (446 aa)
     
  0.984
swsn-3
Protein SWSN-3 (338 aa)
     
  0.980
isw-1
Chromatin-remodeling complex ATPase chain isw-1 ; Energy-transducing component of a NURF-like (nucleosome- remodeling factor-like) complex, which would catalyze ATP- dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates (1009 aa)
     
  0.979
C52B9.8
Protein C52B9.8 (1336 aa)
     
  0.975
pbrm-1
PolyBRoMo domain containing family member (pbrm-1) (1883 aa)
     
  0.970
let-526
LEThal family member (let-526) (1687 aa)
     
  0.965
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, nematode
Server load: low (1%)