searching ... STRING: functional protein association networks

There are several matches for 'RNA_32'.
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1948 matches

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organism

protein

Homo sapiens

DHX32 - Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; DEAH-box helicase 32; Belongs to the DEAD box helicase family. DEAH subfamily. [a.k.a. AAL26551.1, DHX32_HUMAN, CCDS7652]

Homo sapiens

FTSJ1 - Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. TRM7 subfamily. [a.k.a. NP_036412, UPI0000001C19, TRMT7]

Escherichia coli K12

rpoH - RNA polymerase, sigma 32 (sigma H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. Intracellular concentration of free RpoH protein increases in response to heat shock, which causes association with RNA polymerase (RNAP) and initiation of transcription of heat shock genes, including numerous global transcriptional regulators and genes involved in maintaining membrane functionality and homeostasis. RpoH is then quic [...] [a.k.a. AAC76486.1, b3461, NZ_STEB01000004.1]

Niastella koreensis

AEV97602.1 - RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: dfe:Dfer_1704 RNA polymerase, sigma 32 subunit, RpoH; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma-70; Belongs to the sigma-70 factor family. ECF subfamily. [a.k.a. Niako_1227, AEV97602, IPR013325]

Thiothrix nivea

EIJ35873.1 - RNA polymerase, sigma 32 subunit, RpoH; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR007627:IPR007630:IPR012759:IPR014284; KEGG: tgr:Tgr7_2991 RNA polymerase, sigma 32 subunit, RpoH; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70. [a.k.a. Thini_3358, RNA polymerase, sigma 32 subunit, RpoH, EIJ35873]

Methylobacterium nodulans

Mnod_1717 - RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: met:M446_4806 RNA polymerase, sigma 32 subunit, RpoH. [a.k.a. ACL56707.1, RNA polymerase, sigma 32 subunit, RpoH, ACL56707]

Sebaldella termitidis

ACZ09785.1 - RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: pca:Pcar_1430 DNA-directed RNA polymerase, sigma 70/sigma 32 subunit. [a.k.a. Sterm_2942, ACZ09785, D1ANI1]

Clostridium sp. DLVIII

EHJ02244.1 - KEGG: bco:Bcell_0952 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. [a.k.a. CDLVIII_5776, 0003700, 0016987]

Glaciecola sp. 4H37YE5

AEE24863.1 - KEGG: pat:Patl_3948 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein. [a.k.a. Glaag_3937, AEE24863, RNA polymerase, sigma 32 subunit, RpoH]

10)

Megasphaera micronuciformis

EFQ04612.1 - Recombination and repair protein RecT domain protein; KEGG: rno:682370 0.0074 similar to DNA-directed RNA polymerase III 32 kDa polypeptide (RNA polymerase III C32 subunit); K03024 DNA-directed RNA polymerase III subunit C31. [a.k.a. HMPREF9429_00548, IPR018330, E2ZAT0_9FIRM]

11)

Thermoanaerobacterium xylanolyticum

AEF17005.1 - RNA polymerase, sigma 32 subunit, RpoH; KEGG: tte:TTE1755 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2. [a.k.a. Thexy_0971, RNA polymerase, sigma 32 subunit, RpoH, txy:Thexy_0971]

12)

Methylobacter tundripaludum

EGW20609.1 - RNA polymerase, sigma 32 subunit, RpoH; KEGG: nde:NIDE0990 RNA polymerase sigma factor RpoD (sigma-70); TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3. [a.k.a. Mettu_3755, EGW20609, RNA polymerase, sigma 32 subunit, RpoH]

13)

Peregrinibacteria bacterium GW2011GWF23829

KKQ68750.1 - RNA polymerase, sigma 32 subunit, RpoH, RNA polymerase sigma-32 factor; Belongs to the sigma-70 factor family. [a.k.a. US89_C0006G0091, A0A0G0JZX6_9BACT, KKQ68750]

14)

Intrasporangium calvum

ADU47542.1 - RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: sgr:SGR_2758 RNA polymerase sigma factor SigD; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. [a.k.a. Intca_1019, ADU47542, RNA polymerase, sigma-24 subunit, ECF subfamily]

15)

Ochrobactrum anthropi

Oant_1137 - RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bmb:BruAb1_1748 RNA polymerase sigma-70 factor family protein. [a.k.a. ABS13857.1, RNA polymerase, sigma 32 subunit, RpoH, A6WY03]

16)

Haliangium ochraceum

Hoch_2729 - RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: scl:sce5869 RNA polymerase sigma factor. [a.k.a. ACY15258.1, D0LN81, RNA polymerase, sigma 32 subunit, RpoH]

17)

Pirellula staleyi

Psta_2560 - RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD. [a.k.a. ADB17229.1, RNA polymerase, sigma 32 subunit, RpoH, NC_013720.1]

18)

Anaerococcus prevotii DSM 20548

Apre_1642 - RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; KEGG: bcy:Bcer98_3019 RNA polymerase sigma factor RpoD. [a.k.a. ACV29663.1, RNA polymerase, sigma 32 subunit, RpoH, apr:Apre_1642]

19)

Methylobacterium radiotolerans

ACB25685.1 - RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mex:Mext_3881 RNA polymerase sigma factor, sigma-70 family. [a.k.a. Mrad2831_3709, ACB25685, RNA polymerase, sigma 32 subunit, RpoH]

20)

Methylobacterium sp. 446

M446_4806 - RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mex:Mext_3881 RNA polymerase sigma factor, sigma-70 family. [a.k.a. ACA19136.1, met:M446_4806, RNA polymerase, sigma 32 subunit, RpoH]

1948 matches

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